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ERX3967078: NextSeq 500 paired end sequencing
1 ILLUMINA (NextSeq 500) run: 2.2M spots, 656M bases, 245.1Mb downloads

Submitted by: HELMHOLTZ CENTRE FOR ENVIRONMENTAL RESEARCH - UFZ
Study: Complete genome sequences of three novel Clostridia strains isolated from a chain elongation reactor
show Abstracthide Abstract
Hitherto, few bacterial species have been reported to convert lactate to n-caproate. Here, we report the complete genome sequences of three novel Clostridia strains that were isolated from an anaerobic bioreactor producing caproate from lactate-rich corn silage. The strains were isolated on lactate as sole carbon source and produce n-caproate, n-butyrate and iso-butyrate, besides acetate. Genomes were assembled using a short-read and long-read sequencing hybrid approach and genes involved in lactate-based chain elongation were identified.
Sample: Clostridia UBA4871 sp. strain BL-4
SAMEA6567124 • ERS4331465 • All experiments • All runs
Library:
Name: unspecified
Instrument: NextSeq 500
Strategy: WGS
Source: GENOMIC
Selection: size fractionation
Layout: PAIRED
Runs: 1 run, 2.2M spots, 656M bases, 245.1Mb
Run# of Spots# of BasesSizePublished
ERR39592742,172,274656M245.1Mb2020-06-05

ID:
11025496

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